Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Tnfsf9P41274 Gm5422-201ENSMUST00000050717 2721 ntBASIC11.88□□□□□ -0.51
Tnfsf9P41274 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm5846-201ENSMUST00000193146 1414 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 AC122197.2-201ENSMUST00000219196 1635 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm45495-201ENSMUST00000200940 1700 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm6963-201ENSMUST00000147879 379 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm2260-201ENSMUST00000184965 657 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm44262-201ENSMUST00000204969 372 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Aprt-ps-201ENSMUST00000212311 505 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Mettl6-204ENSMUST00000227595 1027 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Ctif-201ENSMUST00000165559 6173 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.87□□□□□ -0.51
Tnfsf9P41274 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm14866-201ENSMUST00000149206 2118 ntTSL 2 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.87□□□□□ -0.51
Tnfsf9P41274 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC11.86□□□□□ -0.51
Tnfsf9P41274 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.86□□□□□ -0.51
Tnfsf9P41274 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Brd2-202ENSMUST00000095347 2617 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Rpe-202ENSMUST00000113995 2713 ntTSL 3 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Prkaca-ps1-201ENSMUST00000120823 919 ntBASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm32999-201ENSMUST00000192693 562 ntBASIC11.86□□□□□ -0.51
Tnfsf9P41274 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Tnfsf9P41274 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms