Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 D730001G18Rik-202ENSMUST00000191407 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm7789-202ENSMUST00000211273 1400 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Fam60a-201ENSMUST00000054080 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm4366-201ENSMUST00000201488 1342 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC10.18□□□□□ -0.78
Timp3P39876 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Gm6082-201ENSMUST00000215204 454 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Pxn-214ENSMUST00000212819 1689 ntTSL 5 BASIC10.18□□□□□ -0.78
Timp3P39876 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Gm9025-201ENSMUST00000122415 1575 ntBASIC10.18□□□□□ -0.78
Timp3P39876 AC113060.1-201ENSMUST00000225689 1573 ntBASIC10.18□□□□□ -0.78
Timp3P39876 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Timp3P39876 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.17□□□□□ -0.78
Timp3P39876 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Timp3P39876 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC10.17□□□□□ -0.78
Timp3P39876 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC10.17□□□□□ -0.78
Timp3P39876 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Gm16570-201ENSMUST00000161951 436 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.17□□□□□ -0.78
Timp3P39876 Gm6652-201ENSMUST00000186414 1070 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Ighv1-62-201ENSMUST00000193406 350 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC10.17□□□□□ -0.78
Timp3P39876 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Timp3P39876 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.17□□□□□ -0.78
Timp3P39876 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Timp3P39876 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Timp3P39876 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms