Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC10.85□□□□□ -0.67
Upk2P38575 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Upk2P38575 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk2P38575 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Gm44831-201ENSMUST00000208469 2989 ntBASIC10.84□□□□□ -0.67
Upk2P38575 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Upk2P38575 CT573086.2-201ENSMUST00000227277 4992 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC10.84□□□□□ -0.67
Upk2P38575 Gm2546-201ENSMUST00000182630 991 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 AY702102-202ENSMUST00000194651 1173 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC10.84□□□□□ -0.67
Upk2P38575 Gm42627-201ENSMUST00000197347 224 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Gm42937-201ENSMUST00000197360 752 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gm45880-201ENSMUST00000213041 853 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Upk2P38575 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 AC131068.2-201ENSMUST00000226175 1453 ntBASIC10.84□□□□□ -0.67
Upk2P38575 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Cdadc1-201ENSMUST00000022555 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Upk2P38575 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC10.84□□□□□ -0.67
Upk2P38575 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC10.83□□□□□ -0.68
Upk2P38575 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.83□□□□□ -0.68
Upk2P38575 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Gm24830-201ENSMUST00000102024 166 ntBASIC10.83□□□□□ -0.68
Upk2P38575 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Gm5597-201ENSMUST00000182353 1193 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC10.83□□□□□ -0.68
Upk2P38575 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk2P38575 Gm26232-201ENSMUST00000083360 166 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Rnu1b6-201ENSMUST00000083839 166 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Upk2P38575 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Upk2P38575 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Arhgef10l-202ENSMUST00000069623 4531 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Gm6203-201ENSMUST00000209575 1342 ntBASIC10.83□□□□□ -0.68
Upk2P38575 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Upk2P38575 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms