Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Tbc1d14-210ENSMUST00000140607 4649 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
RxrbP28704 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RxrbP28704 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RxrbP28704 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Gm2238-201ENSMUST00000192074 3669 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Cyb561d1-203ENSMUST00000106655 4275 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Gm28719-201ENSMUST00000187779 1757 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
RxrbP28704 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.41□□□□□ -0.42
RxrbP28704 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC12.41□□□□□ -0.42
RxrbP28704 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC12.41□□□□□ -0.42
RxrbP28704 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
RxrbP28704 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Gm8099-201ENSMUST00000200510 742 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Gm7287-201ENSMUST00000205267 602 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.41□□□□□ -0.42
RxrbP28704 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC12.41□□□□□ -0.42
RxrbP28704 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
RxrbP28704 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
RxrbP28704 AC093022.4-203ENSMUST00000228523 2657 ntBASIC12.41□□□□□ -0.42
RxrbP28704 Zbtb16-201ENSMUST00000093852 5114 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
RxrbP28704 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.4□□□□□ -0.42
RxrbP28704 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
RxrbP28704 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
RxrbP28704 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 AC108858.2-201ENSMUST00000228186 1425 ntBASIC12.4□□□□□ -0.42
RxrbP28704 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Gm10156-201ENSMUST00000122364 462 ntBASIC12.4□□□□□ -0.42
RxrbP28704 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Gm23363-201ENSMUST00000175024 79 ntBASIC12.4□□□□□ -0.42
RxrbP28704 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC12.4□□□□□ -0.42
RxrbP28704 Gm8515-201ENSMUST00000194852 576 ntBASIC12.4□□□□□ -0.42
RxrbP28704 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.4□□□□□ -0.42
RxrbP28704 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
RxrbP28704 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
RxrbP28704 Sp2-202ENSMUST00000107623 2907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.4□□□□□ -0.42
RxrbP28704 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
RxrbP28704 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
RxrbP28704 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
RxrbP28704 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
RxrbP28704 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms