Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm27627-201ENSMUST00000183644 150 ntBASIC12.36□□□□□ -0.43
Nckap1P28660 Mir6979-201ENSMUST00000183927 56 ntBASIC12.36□□□□□ -0.43
Nckap1P28660 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.36□□□□□ -0.43
Nckap1P28660 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.36□□□□□ -0.43
Nckap1P28660 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nckap1P28660 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC12.36□□□□□ -0.43
Nckap1P28660 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.36□□□□□ -0.43
Nckap1P28660 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Nckap1P28660 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Nckap1P28660 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Nckap1P28660 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 2310007B03Rik-201ENSMUST00000043718 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm14644-201ENSMUST00000116671 647 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm12266-201ENSMUST00000120311 962 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm12566-201ENSMUST00000121479 359 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.35□□□□□ -0.43
Nckap1P28660 B9d1os-201ENSMUST00000137010 674 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm18304-201ENSMUST00000189162 546 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
Nckap1P28660 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Cd37-202ENSMUST00000098461 1227 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.35□□□□□ -0.43
Nckap1P28660 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC12.35□□□□□ -0.43
Nckap1P28660 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Nckap1P28660 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Nckap1P28660 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nckap1P28660 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC12.34□□□□□ -0.43
Nckap1P28660 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.34□□□□□ -0.43
Nckap1P28660 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Nckap1P28660 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.34□□□□□ -0.43
Nckap1P28660 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Gm12286-201ENSMUST00000119246 1002 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Gm24749-201ENSMUST00000157838 343 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Gm9022-201ENSMUST00000182482 992 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Gm43378-201ENSMUST00000199336 582 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Gm3786-201ENSMUST00000202659 378 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Gm44958-201ENSMUST00000203734 736 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Gm9996-201ENSMUST00000070359 913 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Nckap1P28660 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.34□□□□□ -0.43
Nckap1P28660 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Nckap1P28660 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms