Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Prr15l-201ENSMUST00000054311 1342 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Col8a2P25318 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC10.32□□□□□ -0.76
Col8a2P25318 Celf2-225ENSMUST00000183091 2177 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Vps25-204ENSMUST00000107280 876 ntTSL 2 BASIC10.32□□□□□ -0.76
Col8a2P25318 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Col8a2P25318 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm23119-201ENSMUST00000158610 140 ntBASIC10.32□□□□□ -0.76
Col8a2P25318 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC10.32□□□□□ -0.76
Col8a2P25318 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.32□□□□□ -0.76
Col8a2P25318 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm8913-201ENSMUST00000209491 641 ntBASIC10.32□□□□□ -0.76
Col8a2P25318 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm10578-202ENSMUST00000211070 2876 ntTSL 2 BASIC10.32□□□□□ -0.76
Col8a2P25318 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Col8a2P25318 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm37513-201ENSMUST00000194830 2268 ntBASIC10.32□□□□□ -0.76
Col8a2P25318 Gm38378-201ENSMUST00000195153 2268 ntBASIC10.32□□□□□ -0.76
Col8a2P25318 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Borcs7-201ENSMUST00000074912 2176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 CU062626.3-201ENSMUST00000225522 1411 ntBASIC10.32□□□□□ -0.76
Col8a2P25318 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Col8a2P25318 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col8a2P25318 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 D330041H03Rik-205ENSMUST00000181014 1903 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm18227-201ENSMUST00000211082 1468 ntBASIC10.31□□□□□ -0.76
Col8a2P25318 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.31□□□□□ -0.76
Col8a2P25318 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Arhgap1-204ENSMUST00000111331 2883 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC10.31□□□□□ -0.76
Col8a2P25318 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Col8a2P25318 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Gstp-ps-201ENSMUST00000195526 631 ntBASIC10.31□□□□□ -0.76
Col8a2P25318 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC10.31□□□□□ -0.76
Col8a2P25318 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC10.31□□□□□ -0.76
Col8a2P25318 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC10.31□□□□□ -0.76
Col8a2P25318 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Col8a2P25318 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Col8a2P25318 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms