Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 1700041M19Rik-202ENSMUST00000190908 1123 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Gm38002-201ENSMUST00000193255 180 ntBASIC12.38□□□□□ -0.43
PdgfaP20033 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC12.38□□□□□ -0.43
PdgfaP20033 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PdgfaP20033 Gm12846-201ENSMUST00000120431 1373 ntBASIC12.38□□□□□ -0.43
PdgfaP20033 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfaP20033 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
PdgfaP20033 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Kif1a-202ENSMUST00000112958 5931 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
PdgfaP20033 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC12.38□□□□□ -0.43
PdgfaP20033 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
PdgfaP20033 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
PdgfaP20033 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.37□□□□□ -0.43
PdgfaP20033 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm12203-201ENSMUST00000118235 598 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Gm12209-201ENSMUST00000120089 596 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.37□□□□□ -0.43
PdgfaP20033 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.37□□□□□ -0.43
PdgfaP20033 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm27682-201ENSMUST00000183930 110 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm43822-201ENSMUST00000200285 476 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm5161-201ENSMUST00000075243 853 ntBASIC12.37□□□□□ -0.43
PdgfaP20033 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
PdgfaP20033 Fcrls-201ENSMUST00000090986 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
PdgfaP20033 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Usp20-211ENSMUST00000170476 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfaP20033 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfaP20033 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Gm1335-201ENSMUST00000121653 386 ntBASIC12.36□□□□□ -0.43
PdgfaP20033 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Gm27501-201ENSMUST00000183599 107 ntBASIC12.36□□□□□ -0.43
PdgfaP20033 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC12.36□□□□□ -0.43
PdgfaP20033 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
PdgfaP20033 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.36□□□□□ -0.43
PdgfaP20033 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.36□□□□□ -0.43
PdgfaP20033 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfaP20033 Zfp783-204ENSMUST00000130490 4419 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
PdgfaP20033 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.36□□□□□ -0.43
PdgfaP20033 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
PdgfaP20033 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfaP20033 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.35□□□□□ -0.43
PdgfaP20033 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfaP20033 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
PdgfaP20033 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms