Protein–RNA interactions for Protein: P18181

Cd48, CD48 antigen, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd48P18181 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cd48P18181 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cd48P18181 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Cd48P18181 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Pdhx-201ENSMUST00000011058 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Olfr742-202ENSMUST00000213935 2117 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.12□□□□□ -0.63
Cd48P18181 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Cd48P18181 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.12□□□□□ -0.63
Cd48P18181 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd48P18181 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Cd48P18181 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Gm5053-201ENSMUST00000208361 1678 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.11□□□□□ -0.63
Cd48P18181 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.11□□□□□ -0.63
Cd48P18181 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC11.11□□□□□ -0.63
Cd48P18181 Gm8652-201ENSMUST00000181363 964 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Gm29649-201ENSMUST00000185649 419 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd48P18181 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC11.11□□□□□ -0.63
Cd48P18181 Gm9794-201ENSMUST00000202370 423 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.11□□□□□ -0.63
Cd48P18181 AC165260.3-202ENSMUST00000224550 1031 ntBASIC11.11□□□□□ -0.63
Cd48P18181 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Cd48P18181 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Rims2-202ENSMUST00000082054 4800 ntAPPRIS P3 TSL 2 BASIC11.11□□□□□ -0.63
Cd48P18181 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.11□□□□□ -0.63
Cd48P18181 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC11.11□□□□□ -0.63
Cd48P18181 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Cd48P18181 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.1□□□□□ -0.63
Cd48P18181 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd48P18181 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.1□□□□□ -0.63
Cd48P18181 Cd72-201ENSMUST00000030179 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd48P18181 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm11478-201ENSMUST00000117851 599 ntBASIC11.1□□□□□ -0.63
Cd48P18181 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd48P18181 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC11.1□□□□□ -0.63
Cd48P18181 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.1□□□□□ -0.63
Cd48P18181 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC11.1□□□□□ -0.63
Cd48P18181 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Cd48P18181 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC11.1□□□□□ -0.63
Cd48P18181 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.1□□□□□ -0.63
Cd48P18181 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Cd48P18181 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 364.7 ms