Protein–RNA interactions for Protein: P13297

Msx1, Homeobox protein MSX-1, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx1P13297 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC11.93□□□□□ -0.5
Msx1P13297 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 Gm13316-201ENSMUST00000140537 691 ntBASIC11.93□□□□□ -0.5
Msx1P13297 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Gm26909-201ENSMUST00000181668 627 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Gm37502-201ENSMUST00000192981 356 ntTSL 2 BASIC11.93□□□□□ -0.5
Msx1P13297 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
Msx1P13297 Gm29787-201ENSMUST00000222129 849 ntBASIC11.93□□□□□ -0.5
Msx1P13297 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
Msx1P13297 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.93□□□□□ -0.5
Msx1P13297 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.93□□□□□ -0.5
Msx1P13297 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Msx1P13297 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Mypopos-202ENSMUST00000205975 2321 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC11.92□□□□□ -0.5
Msx1P13297 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Eloc-201ENSMUST00000115352 960 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm12291-201ENSMUST00000121627 311 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Gm15276-201ENSMUST00000145953 498 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Gm20918-202ENSMUST00000188637 1227 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC11.92□□□□□ -0.5
Msx1P13297 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC11.92□□□□□ -0.5
Msx1P13297 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC11.92□□□□□ -0.5
Msx1P13297 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Gm3052-202ENSMUST00000188254 2224 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Msx1P13297 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
Msx1P13297 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.92□□□□□ -0.5
Msx1P13297 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Msx1P13297 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.91□□□□□ -0.5
Msx1P13297 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Msx1P13297 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Msx1P13297 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms