Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Eif5a-206ENSMUST00000108609 849 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm9358-201ENSMUST00000183067 927 ntBASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc6P10629 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Gm17831-201ENSMUST00000205579 900 ntBASIC13.7□□□□□ -0.22
Hoxc6P10629 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Ablim2-209ENSMUST00000129347 1995 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Hoxc6P10629 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.7□□□□□ -0.22
Hoxc6P10629 AC091458.1-201ENSMUST00000220902 1361 ntBASIC13.7□□□□□ -0.22
Hoxc6P10629 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Hoxc6P10629 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm4735-201ENSMUST00000138679 1302 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm5855-201ENSMUST00000200240 1305 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Adamts7-207ENSMUST00000147250 4833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Rprl1-201ENSMUST00000158050 327 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm9132-201ENSMUST00000210182 832 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 AC154290.1-201ENSMUST00000223786 1240 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Hoxc6P10629 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.69□□□□□ -0.22
Hoxc6P10629 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.69□□□□□ -0.22
Hoxc6P10629 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Hoxc6P10629 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm3052-202ENSMUST00000188254 2224 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm21998-201ENSMUST00000117552 1308 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm15573-201ENSMUST00000119487 540 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm19287-201ENSMUST00000203190 358 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 CT030637.1-201ENSMUST00000228016 669 ntBASIC13.68□□□□□ -0.22
Hoxc6P10629 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Hoxc6P10629 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Hoxc6P10629 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms