Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Met-202ENSMUST00000115442 4663 ntAPPRIS P1 TSL 5 BASIC9.82□□□□□ -0.84
Hoxd3P09027 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.82□□□□□ -0.84
Hoxd3P09027 AC151904.4-201ENSMUST00000219868 1319 ntBASIC9.82□□□□□ -0.84
Hoxd3P09027 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm19221-201ENSMUST00000221827 1477 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Cacna2d1-201ENSMUST00000039370 3933 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm24255-201ENSMUST00000104481 128 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 6030468B19Rik-201ENSMUST00000106331 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm13813-201ENSMUST00000120998 787 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm11233-201ENSMUST00000122357 634 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC9.81□□□□□ -0.84
Hoxd3P09027 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm20482-202ENSMUST00000174729 825 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm2546-201ENSMUST00000182630 991 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm7967-201ENSMUST00000190991 399 ntTSL 3 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm8176-201ENSMUST00000191297 1099 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm42732-201ENSMUST00000202887 1197 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 AC152169.2-201ENSMUST00000224558 613 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 CT025533.2-201ENSMUST00000228715 1248 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Rassf8-202ENSMUST00000058538 1131 ntBASIC9.81□□□□□ -0.84
Hoxd3P09027 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Zhx2-201ENSMUST00000096430 4376 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Clec12b-202ENSMUST00000112082 1335 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC9.81□□□□□ -0.84
Hoxd3P09027 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Hoxd3P09027 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Mtus1-202ENSMUST00000059115 6548 ntTSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm44401-201ENSMUST00000204462 2375 ntBASIC9.8□□□□□ -0.84
Hoxd3P09027 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Zeb2-201ENSMUST00000028229 5335 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm26083-201ENSMUST00000157904 193 ntBASIC9.8□□□□□ -0.84
Hoxd3P09027 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm20659-201ENSMUST00000176599 604 ntTSL 3 BASIC9.8□□□□□ -0.84
Hoxd3P09027 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC9.8□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms