Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm44124-201ENSMUST00000204159 472 ntBASIC10.88□□□□□ -0.67
P04224 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC10.88□□□□□ -0.67
P04224 AC154305.4-201ENSMUST00000224520 614 ntBASIC10.88□□□□□ -0.67
P04224 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.88□□□□□ -0.67
P04224 AC154276.1-201ENSMUST00000228874 1299 ntBASIC10.88□□□□□ -0.67
P04224 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Tmem86b-201ENSMUST00000055085 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Rn7sk-201ENSMUST00000083103 331 ntBASIC10.88□□□□□ -0.67
P04224 Gm26315-201ENSMUST00000083890 321 ntBASIC10.88□□□□□ -0.67
P04224 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
P04224 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
P04224 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC10.88□□□□□ -0.67
P04224 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
P04224 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
P04224 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gm6447-201ENSMUST00000118905 835 ntBASIC10.87□□□□□ -0.67
P04224 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC10.87□□□□□ -0.67
P04224 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC10.87□□□□□ -0.67
P04224 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC10.87□□□□□ -0.67
P04224 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC10.87□□□□□ -0.67
P04224 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC10.87□□□□□ -0.67
P04224 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
P04224 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.87□□□□□ -0.67
P04224 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Tle3-202ENSMUST00000159050 2304 ntTSL 5 BASIC10.87□□□□□ -0.67
P04224 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.87□□□□□ -0.67
P04224 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
P04224 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.87□□□□□ -0.67
P04224 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Zeb1-201ENSMUST00000025081 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
P04224 Agtrap-201ENSMUST00000030865 3996 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10.86□□□□□ -0.67
P04224 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC10.86□□□□□ -0.67
P04224 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P04224 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.86□□□□□ -0.67
P04224 Grpel1-201ENSMUST00000031099 3528 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Gstt2-208ENSMUST00000220440 2254 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
P04224 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P04224 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC10.86□□□□□ -0.67
P04224 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
P04224 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.86□□□□□ -0.67
P04224 Gm12151-201ENSMUST00000121374 290 ntBASIC10.86□□□□□ -0.67
P04224 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
P04224 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.86□□□□□ -0.67
P04224 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.86□□□□□ -0.67
P04224 Mir6956-201ENSMUST00000183598 62 ntBASIC10.86□□□□□ -0.67
P04224 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms