Protein–RNA interactions for Protein: P03953

Cfd, Complement factor D, mousemouse

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CfdP03953 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
CfdP03953 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
CfdP03953 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Mindy1-201ENSMUST00000039537 2800 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Gper1-201ENSMUST00000066211 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 AC124397.2-201ENSMUST00000225575 2215 ntBASIC10.32□□□□□ -0.76
CfdP03953 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Gm8805-201ENSMUST00000117848 313 ntBASIC10.32□□□□□ -0.76
CfdP03953 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC10.32□□□□□ -0.76
CfdP03953 Gm5863-201ENSMUST00000121760 1008 ntBASIC10.32□□□□□ -0.76
CfdP03953 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC10.32□□□□□ -0.76
CfdP03953 Gm24694-201ENSMUST00000180054 110 ntBASIC10.32□□□□□ -0.76
CfdP03953 Gm27838-201ENSMUST00000184829 128 ntBASIC10.32□□□□□ -0.76
CfdP03953 Gm27663-201ENSMUST00000184839 110 ntBASIC10.32□□□□□ -0.76
CfdP03953 Tfr2-208ENSMUST00000199054 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Gm8099-201ENSMUST00000200510 742 ntBASIC10.32□□□□□ -0.76
CfdP03953 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC10.32□□□□□ -0.76
CfdP03953 AC124732.1-201ENSMUST00000221551 910 ntBASIC10.32□□□□□ -0.76
CfdP03953 Cdk7-205ENSMUST00000225990 1159 ntBASIC10.32□□□□□ -0.76
CfdP03953 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC10.32□□□□□ -0.76
CfdP03953 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC10.32□□□□□ -0.76
CfdP03953 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.32□□□□□ -0.76
CfdP03953 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
CfdP03953 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC10.31□□□□□ -0.76
CfdP03953 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
CfdP03953 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
CfdP03953 Snord83b-201ENSMUST00000104546 94 ntBASIC10.31□□□□□ -0.76
CfdP03953 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
CfdP03953 Gm6152-201ENSMUST00000151704 340 ntBASIC10.31□□□□□ -0.76
CfdP03953 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gm27989-201ENSMUST00000184721 107 ntBASIC10.31□□□□□ -0.76
CfdP03953 Gm2756-201ENSMUST00000195851 400 ntBASIC10.31□□□□□ -0.76
CfdP03953 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC10.31□□□□□ -0.76
CfdP03953 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC10.31□□□□□ -0.76
CfdP03953 Gm45195-201ENSMUST00000205597 1008 ntBASIC10.31□□□□□ -0.76
CfdP03953 Gm44771-201ENSMUST00000206975 626 ntBASIC10.31□□□□□ -0.76
CfdP03953 Rsph1-201ENSMUST00000024832 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gm24136-201ENSMUST00000083374 165 ntBASIC10.31□□□□□ -0.76
CfdP03953 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 BC030500-201ENSMUST00000062978 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Cbln3-201ENSMUST00000063871 4866 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Ush1c-201ENSMUST00000009667 3072 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
CfdP03953 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 AC159621.2-201ENSMUST00000223519 1326 ntBASIC10.31□□□□□ -0.76
CfdP03953 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC10.31□□□□□ -0.76
CfdP03953 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
CfdP03953 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms