Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Gm19163-201ENSMUST00000223313 780 ntBASIC12.75□□□□□ -0.37
CopeO89079 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CopeO89079 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Tubgcp2-201ENSMUST00000026547 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CopeO89079 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CopeO89079 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.74□□□□□ -0.37
CopeO89079 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.74□□□□□ -0.37
CopeO89079 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
CopeO89079 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Gm32025-201ENSMUST00000217960 307 ntBASIC12.74□□□□□ -0.37
CopeO89079 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CopeO89079 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.74□□□□□ -0.37
CopeO89079 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.74□□□□□ -0.37
CopeO89079 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CopeO89079 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
CopeO89079 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC12.74□□□□□ -0.37
CopeO89079 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Rps6ka6-202ENSMUST00000082034 4170 ntAPPRIS P2 TSL 5 BASIC12.73□□□□□ -0.37
CopeO89079 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.73□□□□□ -0.37
CopeO89079 CT025678.1-201ENSMUST00000214795 2972 ntBASIC12.73□□□□□ -0.37
CopeO89079 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC12.73□□□□□ -0.37
CopeO89079 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopeO89079 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.73□□□□□ -0.37
CopeO89079 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopeO89079 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC12.73□□□□□ -0.37
CopeO89079 Gm38092-201ENSMUST00000195600 653 ntBASIC12.73□□□□□ -0.37
CopeO89079 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
CopeO89079 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
CopeO89079 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CopeO89079 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CopeO89079 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Ldhb-201ENSMUST00000032373 1304 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CopeO89079 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CopeO89079 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC12.72□□□□□ -0.37
CopeO89079 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.72□□□□□ -0.37
CopeO89079 Gm9022-201ENSMUST00000182482 992 ntBASIC12.72□□□□□ -0.37
CopeO89079 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CopeO89079 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.72□□□□□ -0.37
CopeO89079 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms