Protein–RNA interactions for Protein: O88809

Dcx, Neuronal migration protein doublecortin, mousemouse

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DcxO88809 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
DcxO88809 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
DcxO88809 Sh3gl3-206ENSMUST00000179318 1489 ntTSL 5 BASIC13.48□□□□□ -0.25
DcxO88809 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
DcxO88809 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.47□□□□□ -0.25
DcxO88809 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC13.47□□□□□ -0.25
DcxO88809 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC13.47□□□□□ -0.25
DcxO88809 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC13.47□□□□□ -0.25
DcxO88809 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC13.47□□□□□ -0.25
DcxO88809 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm27910-201ENSMUST00000185004 107 ntBASIC13.47□□□□□ -0.25
DcxO88809 Gm9111-201ENSMUST00000219394 709 ntBASIC13.47□□□□□ -0.25
DcxO88809 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
DcxO88809 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
DcxO88809 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Gm7278-201ENSMUST00000119836 1401 ntBASIC13.47□□□□□ -0.25
DcxO88809 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
DcxO88809 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC13.46□□□□□ -0.25
DcxO88809 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 AC130671.2-201ENSMUST00000227224 1621 ntBASIC13.46□□□□□ -0.25
DcxO88809 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
DcxO88809 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
DcxO88809 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.46□□□□□ -0.25
DcxO88809 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Gm14921-201ENSMUST00000118643 908 ntBASIC13.46□□□□□ -0.25
DcxO88809 Gm13668-201ENSMUST00000119237 1001 ntBASIC13.46□□□□□ -0.25
DcxO88809 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.46□□□□□ -0.25
DcxO88809 Gm4726-201ENSMUST00000135604 736 ntBASIC13.46□□□□□ -0.25
DcxO88809 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC13.46□□□□□ -0.25
DcxO88809 Gm6019-201ENSMUST00000148369 736 ntBASIC13.46□□□□□ -0.25
DcxO88809 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Gm43962-201ENSMUST00000203898 190 ntBASIC13.46□□□□□ -0.25
DcxO88809 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC13.46□□□□□ -0.25
DcxO88809 Gm7395-201ENSMUST00000216059 1045 ntBASIC13.46□□□□□ -0.25
DcxO88809 AC166341.2-201ENSMUST00000220571 120 ntBASIC13.46□□□□□ -0.25
DcxO88809 AC125209.1-201ENSMUST00000225812 766 ntBASIC13.46□□□□□ -0.25
DcxO88809 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Lst1-201ENSMUST00000097336 415 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
DcxO88809 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
DcxO88809 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
DcxO88809 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
DcxO88809 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
DcxO88809 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.46□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms