Protein–RNA interactions for Protein: O88704

Hcn1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn1O88704 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.88□□□□□ -0.51
Hcn1O88704 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.88□□□□□ -0.51
Hcn1O88704 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.88□□□□□ -0.51
Hcn1O88704 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 AC138604.1-201ENSMUST00000226969 739 ntBASIC11.88□□□□□ -0.51
Hcn1O88704 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC11.88□□□□□ -0.51
Hcn1O88704 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Cdip1-203ENSMUST00000118703 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Hcn1O88704 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.88□□□□□ -0.51
Hcn1O88704 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Hcn1O88704 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC11.88□□□□□ -0.51
Hcn1O88704 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC11.87□□□□□ -0.51
Hcn1O88704 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Hcn1O88704 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm12329-201ENSMUST00000120829 1007 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.87□□□□□ -0.51
Hcn1O88704 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC11.87□□□□□ -0.51
Hcn1O88704 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm7809-201ENSMUST00000153199 742 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm43133-201ENSMUST00000197472 463 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm8099-201ENSMUST00000200510 742 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm43416-201ENSMUST00000201916 1015 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm44772-201ENSMUST00000207623 1191 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC11.87□□□□□ -0.51
Hcn1O88704 AC140406.1-201ENSMUST00000226481 465 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 AC154462.2-201ENSMUST00000227519 370 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm9823-201ENSMUST00000051212 327 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm8399-201ENSMUST00000082300 1117 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Hcn1O88704 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Hcn1O88704 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.87□□□□□ -0.51
Hcn1O88704 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Hcn1O88704 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Gm43075-201ENSMUST00000198613 3905 ntBASIC11.86□□□□□ -0.51
Hcn1O88704 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC11.86□□□□□ -0.51
Hcn1O88704 Ptger4-201ENSMUST00000047379 3264 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Clpb-201ENSMUST00000001884 4627 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Hcn1O88704 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms