Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smarce1O54941 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Gm7789-202ENSMUST00000211273 1400 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Smarce1O54941 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC14.7□□□□□ -0.06
Smarce1O54941 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Gm27839-201ENSMUST00000184242 106 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 Gm29649-201ENSMUST00000185649 419 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.7□□□□□ -0.06
Smarce1O54941 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smarce1O54941 6030442K20Rik-201ENSMUST00000180835 1540 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 D630033O11Rik-204ENSMUST00000210588 1358 ntTSL 5 BASIC14.7□□□□□ -0.06
Smarce1O54941 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smarce1O54941 Gm2238-201ENSMUST00000192074 3669 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 AC130671.2-201ENSMUST00000227224 1621 ntBASIC14.7□□□□□ -0.06
Smarce1O54941 Mettl8-202ENSMUST00000100037 2254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 AC154517.2-201ENSMUST00000220829 2458 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Gm11597-201ENSMUST00000121423 964 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Gm12138-201ENSMUST00000122180 951 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC14.69□□□□□ -0.06
Smarce1O54941 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Gm5904-201ENSMUST00000210286 865 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Gm45930-201ENSMUST00000221330 292 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 AC022775.2-201ENSMUST00000227885 646 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 Slc38a6-206ENSMUST00000140523 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Smarce1O54941 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Gm43075-201ENSMUST00000198613 3905 ntBASIC14.69□□□□□ -0.06
Smarce1O54941 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smarce1O54941 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC14.69□□□□□ -0.06
Smarce1O54941 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Fnip2-203ENSMUST00000133154 7299 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.68□□□□□ -0.06
Smarce1O54941 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.68□□□□□ -0.06
Smarce1O54941 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.68□□□□□ -0.06
Smarce1O54941 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm10268-201ENSMUST00000085340 555 ntBASIC14.68□□□□□ -0.06
Smarce1O54941 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Gm6091-201ENSMUST00000098307 165 ntBASIC14.68□□□□□ -0.06
Smarce1O54941 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC14.68□□□□□ -0.06
Smarce1O54941 Oxct1-205ENSMUST00000138927 1743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Smarce1O54941 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smarce1O54941 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms