Protein–RNA interactions for Protein: O35134

Polr1a, DNA-directed RNA polymerase I subunit RPA1, mousemouse

Known RBP Predictions only

Length 1,717 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1aO35134 Gm14219-201ENSMUST00000120414 288 ntBASIC18.68■□□□□ 0.58
Polr1aO35134 Gm19166-201ENSMUST00000196041 1063 ntBASIC18.68■□□□□ 0.58
Polr1aO35134 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC18.68■□□□□ 0.58
Polr1aO35134 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
Polr1aO35134 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Morf4l2-202ENSMUST00000080411 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Polr1aO35134 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Polr1aO35134 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC18.67■□□□□ 0.58
Polr1aO35134 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Gm5780-201ENSMUST00000217774 1834 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Polr1aO35134 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC18.67■□□□□ 0.58
Polr1aO35134 Gm13047-201ENSMUST00000117116 815 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Gm9089-201ENSMUST00000122027 526 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Gm8531-201ENSMUST00000188319 893 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Polr1aO35134 Gm8574-201ENSMUST00000203207 924 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC18.67■□□□□ 0.58
Polr1aO35134 AC118639.2-201ENSMUST00000226289 223 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Polr1aO35134 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Gm38346-201ENSMUST00000192379 2639 ntBASIC18.67■□□□□ 0.58
Polr1aO35134 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Polr1aO35134 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm11244-201ENSMUST00000121243 237 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Gm12030-201ENSMUST00000121917 223 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm19091-201ENSMUST00000208120 978 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm23680-201ENSMUST00000083162 164 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Polr1aO35134 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm37859-201ENSMUST00000195529 2173 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Tmem25-201ENSMUST00000002100 2448 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm44065-201ENSMUST00000203184 3527 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm44414-201ENSMUST00000203660 2109 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rftn2-202ENSMUST00000114428 2012 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Rad9b-201ENSMUST00000049009 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Rabggtb-202ENSMUST00000167111 1418 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm3017-201ENSMUST00000203603 1126 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
Polr1aO35134 Gm9139-201ENSMUST00000218817 700 ntBASIC18.66■□□□□ 0.58
Polr1aO35134 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC18.66■□□□□ 0.58
Polr1aO35134 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Polr1aO35134 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 AC166836.1-201ENSMUST00000219933 1795 ntBASIC18.65■□□□□ 0.58
Polr1aO35134 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Polr1aO35134 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Polr1aO35134 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 65 ms