Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Gm3150-201ENSMUST00000166418 204 ntBASIC11.63□□□□□ -0.55
Colca2F8VPY8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Gm38117-201ENSMUST00000194653 939 ntBASIC11.63□□□□□ -0.55
Colca2F8VPY8 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 AC159376.1-201ENSMUST00000218504 630 ntBASIC11.63□□□□□ -0.55
Colca2F8VPY8 Lgals1-201ENSMUST00000089377 800 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Spata18-203ENSMUST00000113548 1623 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 5530401A14Rik-201ENSMUST00000021044 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Colca2F8VPY8 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gsg1-202ENSMUST00000111909 1087 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Rbmx2-ps-201ENSMUST00000119377 930 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm15507-201ENSMUST00000133523 592 ntTSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm14236-201ENSMUST00000142374 872 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm5621-201ENSMUST00000187303 640 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm6108-201ENSMUST00000208365 367 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm35713-201ENSMUST00000210516 199 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Rpl10-ps3-201ENSMUST00000076364 768 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Colca2F8VPY8 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC11.62□□□□□ -0.55
Colca2F8VPY8 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Aebp2-206ENSMUST00000161335 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm26134-201ENSMUST00000178484 110 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm44882-201ENSMUST00000205702 802 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC11.61□□□□□ -0.55
Colca2F8VPY8 AC126799.1-201ENSMUST00000221976 246 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 AC112945.1-201ENSMUST00000226413 514 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 AC102368.1-201ENSMUST00000227161 892 ntBASIC11.61□□□□□ -0.55
Colca2F8VPY8 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Colca2F8VPY8 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms