Protein–RNA interactions for Protein: F6ZDS4

Tpr, Nucleoprotein TPR, mousemouse

Known RBP Predictions only

Length 2,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TprF6ZDS4 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
TprF6ZDS4 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TprF6ZDS4 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
TprF6ZDS4 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
TprF6ZDS4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Mir6973a-201ENSMUST00000183646 78 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 Mir7686-201ENSMUST00000200604 57 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 AC168279.1-201ENSMUST00000214611 382 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Ifitm2-201ENSMUST00000081649 655 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Gm9025-201ENSMUST00000122415 1575 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 AC113060.1-201ENSMUST00000225689 1573 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Cyth3-202ENSMUST00000116456 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Gm15036-201ENSMUST00000118880 400 ntBASIC11.4□□□□□ -0.58
TprF6ZDS4 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Malat1-204ENSMUST00000173523 656 ntTSL 3 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
TprF6ZDS4 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
TprF6ZDS4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Trav11-201ENSMUST00000103585 343 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Trav11d-201ENSMUST00000103648 342 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm12501-201ENSMUST00000119163 529 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm28388-201ENSMUST00000186262 437 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Trav11n-201ENSMUST00000200113 343 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm45570-201ENSMUST00000211137 495 ntTSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 AC140409.3-201ENSMUST00000215601 358 ntTSL 3 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm19994-201ENSMUST00000217086 586 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm7959-201ENSMUST00000221823 1078 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 AC125209.1-201ENSMUST00000225812 766 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Fuk-201ENSMUST00000041382 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm13315-201ENSMUST00000120376 991 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm4879-201ENSMUST00000122190 1272 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm16296-201ENSMUST00000159905 325 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm18463-201ENSMUST00000207258 474 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Higd2a-201ENSMUST00000026986 648 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm44094-201ENSMUST00000204703 2030 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm15459-201ENSMUST00000117405 1941 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Gm8355-201ENSMUST00000177767 1941 ntBASIC11.39□□□□□ -0.59
TprF6ZDS4 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC11.39□□□□□ -0.59
TprF6ZDS4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
TprF6ZDS4 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms