Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm44942-201ENSMUST00000096093 2072 ntBASIC14.81□□□□□ -0.04
Ube4aE9Q735 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC14.81□□□□□ -0.04
Ube4aE9Q735 4833445I07Rik-202ENSMUST00000194104 579 ntTSL 3 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Ripk3-202ENSMUST00000168716 1964 ntTSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.81□□□□□ -0.04
Ube4aE9Q735 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Tmc4-202ENSMUST00000121743 2204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ube4aE9Q735 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 4930588K23Rik-201ENSMUST00000156827 1963 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Gm45266-201ENSMUST00000210111 2173 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Gm44793-201ENSMUST00000136923 582 ntTSL 2 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ighv1-48-201ENSMUST00000191795 294 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Gm6905-201ENSMUST00000205729 511 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Gm40983-201ENSMUST00000222524 502 ntTSL 3 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 AC151275.1-201ENSMUST00000224870 585 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ginm1-202ENSMUST00000065124 300 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Gm5705-201ENSMUST00000066241 711 ntBASIC14.8□□□□□ -0.04
Ube4aE9Q735 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Dbf4-204ENSMUST00000168500 2000 ntTSL 5 BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ube4aE9Q735 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 S100a16-206ENSMUST00000107335 926 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm5419-201ENSMUST00000119301 527 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm10051-201ENSMUST00000145209 414 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Rpl36-ps9-201ENSMUST00000196458 277 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 AC160405.1-201ENSMUST00000218207 1545 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 AC125486.1-201ENSMUST00000218701 320 ntBASIC14.79□□□□□ -0.04
Ube4aE9Q735 Gm32635-201ENSMUST00000221493 1162 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Mrpl41-201ENSMUST00000045604 776 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ube4aE9Q735 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms