Protein–RNA interactions for Protein: E9Q6B2

Ccdc85c, Coiled-coil domain-containing protein 85C, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85cE9Q6B2 Gm17214-201ENSMUST00000164501 541 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm19587-201ENSMUST00000191395 545 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm37852-201ENSMUST00000193027 350 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm6855-201ENSMUST00000206307 790 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm7904-201ENSMUST00000217049 465 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm18968-201ENSMUST00000221319 862 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Dnajc6-205ENSMUST00000106933 5191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 CT009489.1-201ENSMUST00000227740 1893 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Gm43677-201ENSMUST00000198098 2378 ntBASIC15.16■□□□□ 0.02
Ccdc85cE9Q6B2 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Slc7a3-201ENSMUST00000073927 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Trav13d-1-201ENSMUST00000103588 396 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm24248-201ENSMUST00000157321 322 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm17070-201ENSMUST00000170463 784 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 1700018A23Rik-201ENSMUST00000201350 398 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm35960-201ENSMUST00000202712 767 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm43969-201ENSMUST00000204833 535 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm44506-201ENSMUST00000206278 965 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm5599-201ENSMUST00000209602 788 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 AC134537.1-201ENSMUST00000219205 265 ntBASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Dctn1-205ENSMUST00000113919 4292 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Ccdc85cE9Q6B2 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm38344-201ENSMUST00000195306 1353 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Ice2-202ENSMUST00000117246 1201 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm12856-201ENSMUST00000119471 1293 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm13707-201ENSMUST00000123663 600 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm23675-201ENSMUST00000157311 125 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm23119-201ENSMUST00000158610 140 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 AC113082.1-201ENSMUST00000217324 327 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 AC130477.1-201ENSMUST00000226982 420 ntBASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
Ccdc85cE9Q6B2 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 88.3 ms