Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm11244-201ENSMUST00000121243 237 ntBASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gad1-207ENSMUST00000148210 1021 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm7902-201ENSMUST00000198842 947 ntBASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Gm6722-201ENSMUST00000221586 390 ntBASIC12.47□□□□□ -0.41
Col4a6B1AVK5 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Cdk19os-201ENSMUST00000044774 534 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Col4a6B1AVK5 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gm18968-201ENSMUST00000221319 862 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Col4a6B1AVK5 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Tbrg1-201ENSMUST00000117654 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.46□□□□□ -0.42
Col4a6B1AVK5 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rpl19-201ENSMUST00000017548 751 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm26134-201ENSMUST00000178484 110 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm43852-201ENSMUST00000202098 917 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm45410-201ENSMUST00000211331 1093 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 AC168279.1-201ENSMUST00000214611 382 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Rpl19-202ENSMUST00000092425 737 ntAPPRIS ALT1 TSL 3 BASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.45□□□□□ -0.42
Col4a6B1AVK5 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms