Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC140451.2-201ENSMUST00000228030 664 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm4735-201ENSMUST00000138679 1302 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm5855-201ENSMUST00000200240 1305 ntBASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC9□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Daam2-202ENSMUST00000224595 1926 ntBASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm27177-202ENSMUST00000183514 2703 ntBASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Serpinb12-202ENSMUST00000112724 1623 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Zbtb49-201ENSMUST00000094833 2978 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm14760-201ENSMUST00000121831 999 ntBASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mir1982-201ENSMUST00000157368 74 ntBASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tead1-207ENSMUST00000165036 1248 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tead1-212ENSMUST00000171197 1074 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Gm18227-201ENSMUST00000211082 1468 ntBASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Hnrnpf-209ENSMUST00000180020 2280 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
Trav9n-2A0A0G2JDP3 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms