Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm44806-201ENSMUST00000205574 2303 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 H2-Pa-201ENSMUST00000182803 626 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm27847-201ENSMUST00000183711 107 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm27375-201ENSMUST00000183799 107 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm42442-201ENSMUST00000197951 1133 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm9794-201ENSMUST00000202370 423 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 AC167013.1-201ENSMUST00000228592 202 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm6091-201ENSMUST00000098307 165 ntBASIC10.15□□□□□ -0.78
Trav18A0A075B656 Lrrc18-204ENSMUST00000120951 1511 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Trav18A0A075B656 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Pla2g4f-201ENSMUST00000054651 3116 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Trav18A0A075B656 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Mfsd4a-207ENSMUST00000159038 1957 ntAPPRIS P2 TSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm37827-201ENSMUST00000194486 1542 ntBASIC10.14□□□□□ -0.79
Trav18A0A075B656 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 H3f3a-205ENSMUST00000161308 2841 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm12384-201ENSMUST00000119228 919 ntBASIC10.14□□□□□ -0.79
Trav18A0A075B656 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm11964-201ENSMUST00000120982 444 ntBASIC10.14□□□□□ -0.79
Trav18A0A075B656 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Ighv1-60-201ENSMUST00000195816 405 ntBASIC10.14□□□□□ -0.79
Trav18A0A075B656 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Dio1-201ENSMUST00000082426 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Cct5-201ENSMUST00000022842 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gemin4-201ENSMUST00000102500 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Hps1-209ENSMUST00000162061 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Trav18A0A075B656 Gm8228-201ENSMUST00000189949 2192 ntBASIC10.14□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms