Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Smarcb1Q9Z0H3 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Gm22133-201ENSMUST00000102082 109 ntBASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Mir5120-201ENSMUST00000175020 78 ntBASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Gm43138-201ENSMUST00000199123 708 ntBASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Nsd1-205ENSMUST00000224693 852 ntBASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Lrrfip2-213ENSMUST00000216430 1525 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Smarcb1Q9Z0H3 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ighv1-80-201ENSMUST00000103547 351 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gm16481-201ENSMUST00000119074 1227 ntBASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gm43962-201ENSMUST00000203898 190 ntBASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Dhrs4-202ENSMUST00000226168 828 ntBASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Hist1h3a-201ENSMUST00000091701 534 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Pepd-201ENSMUST00000075068 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 AC126262.1-201ENSMUST00000221802 1904 ntBASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Smarcb1Q9Z0H3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Gm23949-201ENSMUST00000104027 127 ntBASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Smarcb1Q9Z0H3 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms