Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Acin1-208ENSMUST00000126166 2369 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Ikzf4-204ENSMUST00000222067 2688 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Tpm1-201ENSMUST00000030185 1797 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Cd63-ps-202ENSMUST00000154992 717 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Gm21027-201ENSMUST00000219300 1236 ntBASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Celf2-205ENSMUST00000114927 1721 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Scn8aQ9WTU3 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm23912-201ENSMUST00000104687 87 ntBASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Zc3hc1-203ENSMUST00000115184 1504 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Tirap-203ENSMUST00000176531 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Orc2-201ENSMUST00000027198 3561 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Cldn18-202ENSMUST00000112882 1750 ntAPPRIS ALT1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 AU022133-201ENSMUST00000200601 873 ntBASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm5705-201ENSMUST00000066241 711 ntBASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Scn8aQ9WTU3 Gm10152-201ENSMUST00000193475 1344 ntBASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm15515-201ENSMUST00000117827 822 ntBASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Stau1-203ENSMUST00000109236 2860 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
Scn8aQ9WTU3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC12.36□□□□□ -0.43
Scn8aQ9WTU3 Gm14132-201ENSMUST00000117188 1719 ntBASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms