Protein–RNA interactions for Protein: Q9R1K7

Tubd1, Tubulin delta chain, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubd1Q9R1K7 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Rbm12b1-201ENSMUST00000050069 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 H3f3b-201ENSMUST00000016703 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Tubd1Q9R1K7 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm6189-201ENSMUST00000164487 2082 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Magohb-205ENSMUST00000173837 897 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm27046-201ENSMUST00000182160 463 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm44364-201ENSMUST00000198368 141 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm43822-201ENSMUST00000200285 476 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 AC126444.1-201ENSMUST00000225938 1768 ntBASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Adh5-201ENSMUST00000005964 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Tubd1Q9R1K7 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm12036-201ENSMUST00000120008 530 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm12164-201ENSMUST00000121695 551 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm5070-201ENSMUST00000177599 862 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm5706-201ENSMUST00000181525 993 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 AA914427-201ENSMUST00000193194 1166 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm3898-202ENSMUST00000216905 328 ntTSL 2 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Mxd3-201ENSMUST00000021941 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Neil1-202ENSMUST00000186410 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Grsf1-202ENSMUST00000113234 2286 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Tubd1Q9R1K7 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms