Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.27□□□□□ -0.6
Clcf1Q9QZM3 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm26083-201ENSMUST00000157904 193 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm27320-201ENSMUST00000184892 109 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm8176-201ENSMUST00000191297 1099 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm30285-201ENSMUST00000214614 422 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm9004-201ENSMUST00000218739 1222 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm4366-201ENSMUST00000201488 1342 ntBASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Clcf1Q9QZM3 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm19221-201ENSMUST00000221827 1477 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm13813-201ENSMUST00000120998 787 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm16296-201ENSMUST00000159905 325 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm20482-202ENSMUST00000174729 825 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm2546-201ENSMUST00000182630 991 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 4933436H12Rik-201ENSMUST00000207304 658 ntTSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 AC167013.1-201ENSMUST00000228592 202 ntBASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.26□□□□□ -0.61
Clcf1Q9QZM3 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Clcf1Q9QZM3 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 45.1 ms