Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC11.8□□□□□ -0.52
SrfQ9JM73 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
SrfQ9JM73 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
SrfQ9JM73 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Fopnl-202ENSMUST00000120707 1414 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Ppil6-201ENSMUST00000105507 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC11.79□□□□□ -0.52
SrfQ9JM73 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tcrg-C4-201ENSMUST00000179181 985 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Esp18-201ENSMUST00000179848 1257 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
SrfQ9JM73 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.79□□□□□ -0.52
SrfQ9JM73 A630035G10Rik-202ENSMUST00000194468 1065 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm38247-201ENSMUST00000194675 433 ntBASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm8285-201ENSMUST00000208293 759 ntBASIC11.79□□□□□ -0.52
SrfQ9JM73 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 AC160962.2-201ENSMUST00000224761 632 ntBASIC11.79□□□□□ -0.52
SrfQ9JM73 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Plp2-201ENSMUST00000033486 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SrfQ9JM73 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SrfQ9JM73 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Med8-204ENSMUST00000106384 1743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SrfQ9JM73 Mir669o-201ENSMUST00000103898 96 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm11511-201ENSMUST00000118146 540 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm8194-201ENSMUST00000159783 859 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC11.78□□□□□ -0.52
SrfQ9JM73 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm10774-201ENSMUST00000188689 204 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm37246-201ENSMUST00000192665 835 ntBASIC11.78□□□□□ -0.52
SrfQ9JM73 Olfr1480-203ENSMUST00000207904 1209 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC11.78□□□□□ -0.52
SrfQ9JM73 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms