Protein–RNA interactions for Protein: Q9JKE2

Trem1, Triggering receptor expressed on myeloid cells 1, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem1Q9JKE2 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Dhx40-201ENSMUST00000018569 3813 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Mir1895-201ENSMUST00000122615 79 ntBASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Gm43474-201ENSMUST00000196415 774 ntBASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Arpp21-223ENSMUST00000162097 3952 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Sparc-202ENSMUST00000108858 2115 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 6430562O15Rik-201ENSMUST00000180491 2488 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Mlc1-202ENSMUST00000109368 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Trem1Q9JKE2 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 4632411P08Rik-201ENSMUST00000181005 3237 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 AC115891.3-201ENSMUST00000219161 2472 ntBASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gm5035-201ENSMUST00000215581 927 ntBASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gm5779-201ENSMUST00000218467 910 ntBASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Zfp462-202ENSMUST00000079605 4684 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Tmem126b-201ENSMUST00000032843 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Gm13920-201ENSMUST00000146134 1663 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Trem1Q9JKE2 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Meox2-201ENSMUST00000041183 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm43372-201ENSMUST00000202662 3016 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm36940-201ENSMUST00000194281 2036 ntBASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Gm14023-201ENSMUST00000144178 1781 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC11.06□□□□□ -0.64
Trem1Q9JKE2 Slc1a2-204ENSMUST00000111213 2093 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms