Protein–RNA interactions for Protein: Q9JHB3

Timp4, Metalloproteinase inhibitor 4, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp4Q9JHB3 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp4Q9JHB3 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.83□□□□□ -0.36
Timp4Q9JHB3 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.83□□□□□ -0.36
Timp4Q9JHB3 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Timp4Q9JHB3 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm23949-201ENSMUST00000104027 127 ntBASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm15711-201ENSMUST00000118889 535 ntBASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 AY036118-201ENSMUST00000200021 923 ntBASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Gm45799-208ENSMUST00000211054 490 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 AC098716.1-201ENSMUST00000213527 703 ntBASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Zfp286-211ENSMUST00000207597 1668 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Timp4Q9JHB3 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm44292-201ENSMUST00000205194 2364 ntBASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 B9d1os-201ENSMUST00000137010 674 ntBASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 CT025694.1-201ENSMUST00000226188 934 ntBASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm5455-201ENSMUST00000058710 715 ntBASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC12.81□□□□□ -0.36
Timp4Q9JHB3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Gm12164-201ENSMUST00000121695 551 ntBASIC12.8□□□□□ -0.36
Timp4Q9JHB3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Gm27627-201ENSMUST00000183644 150 ntBASIC12.8□□□□□ -0.36
Timp4Q9JHB3 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.8□□□□□ -0.36
Timp4Q9JHB3 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms