Protein–RNA interactions for Protein: Q9ESF1

Otof, Otoferlin, mousemouse

Predictions only

Length 1,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OtofQ9ESF1 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 Gm5051-201ENSMUST00000204085 485 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Gm5780-201ENSMUST00000217774 1834 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 Ralgps2-209ENSMUST00000189316 2924 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
OtofQ9ESF1 Gm44260-201ENSMUST00000204946 2094 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 Gm37513-201ENSMUST00000194830 2268 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 Gm38378-201ENSMUST00000195153 2268 ntBASIC12.23□□□□□ -0.45
OtofQ9ESF1 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Crmp1-201ENSMUST00000031004 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm9630-201ENSMUST00000178304 885 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm5706-201ENSMUST00000181525 993 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 4930504D19Rik-201ENSMUST00000204799 349 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm44711-201ENSMUST00000205414 1264 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gm9797-202ENSMUST00000218003 294 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 AC154849.4-201ENSMUST00000224868 365 ntBASIC12.22□□□□□ -0.45
OtofQ9ESF1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
OtofQ9ESF1 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12616-201ENSMUST00000118594 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12624-201ENSMUST00000177615 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12621-201ENSMUST00000177760 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12615-201ENSMUST00000177970 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12622-201ENSMUST00000177975 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12627-201ENSMUST00000178412 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12625-201ENSMUST00000179122 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12614-201ENSMUST00000179586 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm12613-201ENSMUST00000180323 382 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm10731-201ENSMUST00000181171 448 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm28686-201ENSMUST00000187404 609 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Mlf1-201ENSMUST00000061322 1113 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm21998-201ENSMUST00000117552 1308 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm26516-201ENSMUST00000180943 1397 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Gm27196-201ENSMUST00000184787 2582 ntBASIC12.21□□□□□ -0.45
OtofQ9ESF1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Calu-202ENSMUST00000090481 2670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
OtofQ9ESF1 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Gm14058-201ENSMUST00000116082 735 ntBASIC12.21□□□□□ -0.46
OtofQ9ESF1 Gm16166-201ENSMUST00000118291 787 ntBASIC12.21□□□□□ -0.46
OtofQ9ESF1 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC12.21□□□□□ -0.46
OtofQ9ESF1 Rprl1-201ENSMUST00000158050 327 ntBASIC12.21□□□□□ -0.46
OtofQ9ESF1 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Gm18711-201ENSMUST00000199341 750 ntBASIC12.21□□□□□ -0.46
OtofQ9ESF1 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
OtofQ9ESF1 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms