Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Whamm-203ENSMUST00000209044 1879 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Ush1cQ9ES64 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Mapk3-203ENSMUST00000091328 1716 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Ctsc-201ENSMUST00000032779 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.21□□□□□ -0.13
Ush1cQ9ES64 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm5745-201ENSMUST00000183748 313 ntBASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Gm14243-201ENSMUST00000131401 2172 ntTSL 2 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Ush1cQ9ES64 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ush1cQ9ES64 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ush1cQ9ES64 Mog-201ENSMUST00000102665 1704 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ush1cQ9ES64 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Ush1cQ9ES64 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm44094-201ENSMUST00000204703 2030 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm45677-201ENSMUST00000209975 1341 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm15376-201ENSMUST00000122258 783 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm28760-201ENSMUST00000185995 736 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm43094-201ENSMUST00000196549 921 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Gm5186-201ENSMUST00000218781 920 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 2810404F17Rik-201ENSMUST00000156615 1704 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Prr3-203ENSMUST00000172429 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Evl-204ENSMUST00000172409 1955 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Ush1cQ9ES64 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 AC122811.1-201ENSMUST00000222257 2921 ntBASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC14.19□□□□□ -0.14
Ush1cQ9ES64 Gm6447-201ENSMUST00000118905 835 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 96.9 ms