Protein–RNA interactions for Protein: Q9DC33

Hmg20a, High mobility group protein 20A, mousemouse

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmg20aQ9DC33 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Hmg20aQ9DC33 Ces1d-201ENSMUST00000034172 2004 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Patl1-201ENSMUST00000061618 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm17244-201ENSMUST00000192482 3416 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Rtbdn-201ENSMUST00000067472 1908 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Papss1-201ENSMUST00000029666 2600 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Traf7-202ENSMUST00000088464 2504 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 C2cd5-213ENSMUST00000204655 3526 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm23935-201ENSMUST00000102303 57 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm24270-201ENSMUST00000102326 57 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm24245-201ENSMUST00000157318 57 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm26308-201ENSMUST00000157768 69 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm17837-201ENSMUST00000186435 985 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm43575-201ENSMUST00000196420 516 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm14132-201ENSMUST00000117188 1719 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm43267-201ENSMUST00000199664 1796 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Hmg20aQ9DC33 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gm37422-201ENSMUST00000193794 4718 ntBASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Fam110b-201ENSMUST00000054857 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Irf9-205ENSMUST00000138037 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 4933440M02Rik-203ENSMUST00000206609 1747 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gm14767-201ENSMUST00000121559 586 ntBASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gm5425-201ENSMUST00000214125 459 ntBASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.3□□□□□ -0.6
Hmg20aQ9DC33 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms