Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Sh2d6-203ENSMUST00000159877 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Sh2d6-206ENSMUST00000162561 1251 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Gm44100-201ENSMUST00000204329 436 ntBASIC14.77□□□□□ -0.05
Stag1Q9D3E6 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC14.77□□□□□ -0.05
Stag1Q9D3E6 AC131330.1-201ENSMUST00000227814 1015 ntBASIC14.77□□□□□ -0.05
Stag1Q9D3E6 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Ubtf-203ENSMUST00000107115 3199 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Stag1Q9D3E6 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Elp5-201ENSMUST00000108594 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 AC123619.2-202ENSMUST00000225097 1568 ntBASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Stag1Q9D3E6 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gm37105-201ENSMUST00000192251 2085 ntBASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Pyy-202ENSMUST00000127381 529 ntAPPRIS ALT2 TSL 2 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gm8546-201ENSMUST00000178288 1264 ntBASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Dhrs4-202ENSMUST00000226168 828 ntBASIC14.75□□□□□ -0.05
Stag1Q9D3E6 AC169036.1-201ENSMUST00000227994 296 ntBASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Pmp2-201ENSMUST00000029034 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Stag1Q9D3E6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 AC091764.2-201ENSMUST00000218190 1590 ntTSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Caln1-201ENSMUST00000086029 1801 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Gm22133-201ENSMUST00000102082 109 ntBASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Gm22334-201ENSMUST00000158070 133 ntBASIC14.74□□□□□ -0.05
Stag1Q9D3E6 Gm23699-201ENSMUST00000158835 135 ntBASIC14.74□□□□□ -0.05
Stag1Q9D3E6 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Stag1Q9D3E6 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms