Protein–RNA interactions for Protein: Q9CQX5

Cldnd1, Claudin domain-containing protein 1, mousemouse

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1Q9CQX5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Cldnd1Q9CQX5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Adck1-202ENSMUST00000166940 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm11949-201ENSMUST00000117640 372 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm12816-201ENSMUST00000118069 1212 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm15352-201ENSMUST00000118696 270 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm16071-201ENSMUST00000119589 793 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm8737-201ENSMUST00000122208 642 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm23218-201ENSMUST00000158124 276 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm23045-201ENSMUST00000175041 96 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm17826-201ENSMUST00000189720 798 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm43186-201ENSMUST00000198130 824 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm45717-201ENSMUST00000211129 495 ntAPPRIS P1 TSL 3 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm5879-201ENSMUST00000089501 1209 ntBASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Ccdc159-202ENSMUST00000170304 1519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Lbr-201ENSMUST00000005003 3510 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Cldnd1Q9CQX5 Nudt5-205ENSMUST00000179748 1590 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Slc2a4-203ENSMUST00000141837 1776 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 2310035C23Rik-210ENSMUST00000190501 3852 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm13263-201ENSMUST00000121271 838 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm43520-201ENSMUST00000197996 164 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm45575-201ENSMUST00000210283 548 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm2875-201ENSMUST00000211333 360 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 AC134860.1-201ENSMUST00000224867 660 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 n-R5s211-201ENSMUST00000093689 119 ntBASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Gpd2-201ENSMUST00000028167 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Fuca2-201ENSMUST00000060212 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Cldnd1Q9CQX5 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Cldnd1Q9CQX5 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms