Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retreg3Q9CQV4 Gm8228-201ENSMUST00000189949 2192 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm15515-201ENSMUST00000117827 822 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm5638-201ENSMUST00000118618 1258 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm14921-201ENSMUST00000118643 908 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm12329-201ENSMUST00000120829 1007 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm16570-201ENSMUST00000161951 436 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Scnm1-201ENSMUST00000172572 1054 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm9916-201ENSMUST00000192943 1228 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 AC159886.1-201ENSMUST00000217099 1091 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 AC154643.1-201ENSMUST00000225643 625 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Olfr125-201ENSMUST00000050255 1118 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Olfr811-201ENSMUST00000076437 960 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Spink12-201ENSMUST00000081271 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Rnf17-202ENSMUST00000223627 2077 ntBASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retreg3Q9CQV4 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Trpm1-219ENSMUST00000206314 2323 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Ivns1abp-201ENSMUST00000023918 3511 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm3890-201ENSMUST00000182416 207 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm28011-201ENSMUST00000184097 175 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm37866-201ENSMUST00000191950 696 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm38002-201ENSMUST00000193255 180 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gm42430-201ENSMUST00000197209 616 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Retreg3Q9CQV4 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 60.7 ms