Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Gm3052-202ENSMUST00000188254 2224 ntBASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trim34aQ99PP6 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 4930595D18Rik-201ENSMUST00000121608 818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm19459-201ENSMUST00000176240 835 ntBASIC15.25■□□□□ 0.03
Trim34aQ99PP6 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm37246-201ENSMUST00000192665 835 ntBASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm4157-201ENSMUST00000211647 679 ntBASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Csrp2-203ENSMUST00000219502 544 ntTSL 3 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 CT009713.8-201ENSMUST00000225448 560 ntBASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trim34aQ99PP6 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gpr45-201ENSMUST00000114761 1546 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm7049-201ENSMUST00000223520 1712 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm6210-201ENSMUST00000204734 1942 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Rprl1-201ENSMUST00000158050 327 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm3332-201ENSMUST00000189337 928 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Mir219a-1-201ENSMUST00000083621 110 ntBASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Jrk-201ENSMUST00000050234 5853 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trim34aQ99PP6 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Snrpn-201ENSMUST00000059305 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Phyhd1-212ENSMUST00000154647 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm18227-201ENSMUST00000211082 1468 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm24891-201ENSMUST00000104391 136 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm7722-201ENSMUST00000120646 741 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm15906-201ENSMUST00000124746 323 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm23085-201ENSMUST00000157849 293 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm5733-201ENSMUST00000190232 939 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm42682-201ENSMUST00000198349 1265 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm44126-201ENSMUST00000204831 514 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Gm6905-201ENSMUST00000205729 511 ntBASIC15.23■□□□□ 0.03
Trim34aQ99PP6 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trim34aQ99PP6 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms