Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Nnmt-202ENSMUST00000119426 912 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Map1b-203ENSMUST00000223725 2669 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm15004-201ENSMUST00000119192 630 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Aamdc-207ENSMUST00000138060 467 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm4775-201ENSMUST00000169588 402 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm38151-201ENSMUST00000195085 289 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm44315-201ENSMUST00000203041 219 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm18123-201ENSMUST00000210874 822 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 3200001D21Rik-201ENSMUST00000221603 2283 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Styxl1-208ENSMUST00000178515 1651 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm5419-201ENSMUST00000119301 527 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Mir1905-201ENSMUST00000122779 82 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm37981-201ENSMUST00000194280 535 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 2610318N02Rik-202ENSMUST00000207116 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 AC142266.1-201ENSMUST00000228107 415 ntBASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Cdh23Q99PF4 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Ip6k3-201ENSMUST00000025046 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm24078-201ENSMUST00000158184 103 ntBASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Prok2-201ENSMUST00000008273 594 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Uprt-201ENSMUST00000087867 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 AA672651-201ENSMUST00000151550 489 ntTSL 2 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Gm10263-201ENSMUST00000085163 300 ntBASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Trmt1-204ENSMUST00000109768 2044 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Folr1-203ENSMUST00000106983 1307 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Cdh23Q99PF4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm14247-201ENSMUST00000120950 237 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Limd2-201ENSMUST00000045923 2950 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm14807-201ENSMUST00000116640 983 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm28833-201ENSMUST00000189671 559 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Gm43249-201ENSMUST00000200464 458 ntBASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Zfp445-205ENSMUST00000214626 1220 ntTSL 5 BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Cdh23Q99PF4 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms