Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Olfr605-201ENSMUST00000080660 1011 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Ppm1b-204ENSMUST00000112307 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Sf3b1Q99NB9 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 B230206L02Rik-202ENSMUST00000132584 695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm18304-201ENSMUST00000189162 546 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm18730-201ENSMUST00000218038 343 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Olfr1413-201ENSMUST00000074859 1082 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm17080-201ENSMUST00000087588 811 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gm38385-201ENSMUST00000194454 2351 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 AC154262.2-202ENSMUST00000225158 1331 ntBASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Kdelr1-201ENSMUST00000002855 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Sf3b1Q99NB9 Slc7a4-202ENSMUST00000090165 1907 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Gm24231-201ENSMUST00000104315 133 ntBASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Gm12298-201ENSMUST00000126999 731 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Vdac1-201ENSMUST00000020673 891 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 AC163667.3-201ENSMUST00000225774 222 ntBASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Sf3b1Q99NB9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms