Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Mir874-201ENSMUST00000104769 76 ntBASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm9166-201ENSMUST00000120293 561 ntBASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm14055-201ENSMUST00000130262 668 ntTSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm16538-201ENSMUST00000162407 442 ntTSL 2 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm45135-201ENSMUST00000206787 1184 ntBASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Tprg-201ENSMUST00000056087 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Spaca4-201ENSMUST00000094424 707 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Tssk4-201ENSMUST00000007735 1420 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col25a1Q99MQ5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm12337-201ENSMUST00000119634 400 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm12196-201ENSMUST00000120954 262 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm14832-201ENSMUST00000121289 322 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm6485-201ENSMUST00000160676 439 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm7211-201ENSMUST00000172692 1118 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm22121-201ENSMUST00000175148 54 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm9507-202ENSMUST00000180157 654 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm36982-201ENSMUST00000193796 1128 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm5870-201ENSMUST00000196461 282 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm29763-201ENSMUST00000205306 616 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm44980-201ENSMUST00000205826 314 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm18706-201ENSMUST00000210053 1066 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tmem258-201ENSMUST00000040372 606 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm11555-201ENSMUST00000073126 492 ntTSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col25a1Q99MQ5 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Col25a1Q99MQ5 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms