Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm44545-201ENSMUST00000208262 746 ntBASIC10.91□□□□□ -0.66
Scrt1Q99M85 Spcs1-203ENSMUST00000226374 592 ntBASIC10.91□□□□□ -0.66
Scrt1Q99M85 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.91□□□□□ -0.66
Scrt1Q99M85 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Aifm2-203ENSMUST00000099706 3086 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.91□□□□□ -0.66
Scrt1Q99M85 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Scrt1Q99M85 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Nudt18-202ENSMUST00000228554 3619 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Sh3bp5l-201ENSMUST00000073128 2977 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm45643-201ENSMUST00000211364 1484 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm12286-201ENSMUST00000119246 1002 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm11597-201ENSMUST00000121423 964 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC10.9□□□□□ -0.66
Scrt1Q99M85 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm38092-201ENSMUST00000195600 653 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.9□□□□□ -0.66
Scrt1Q99M85 AC135669.1-202ENSMUST00000216742 540 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.9□□□□□ -0.66
Scrt1Q99M85 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Scrt1Q99M85 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Scrt1Q99M85 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Zfp36l1-ps-201ENSMUST00000118349 899 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm12058-201ENSMUST00000118614 437 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm6161-201ENSMUST00000121942 1102 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm6254-201ENSMUST00000168178 1072 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm6153-201ENSMUST00000172004 1058 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm19459-201ENSMUST00000176240 835 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm5641-202ENSMUST00000198699 1080 ntBASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Scrt1Q99M85 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms