Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.08□□□□□ -0.32
Usp11Q99K46 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Snord83b-201ENSMUST00000104546 94 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm12742-201ENSMUST00000117326 410 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp11Q99K46 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC13.08□□□□□ -0.32
Usp11Q99K46 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm43438-201ENSMUST00000198133 379 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm43416-201ENSMUST00000201916 1015 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Gm7104-201ENSMUST00000179741 2532 ntBASIC13.08□□□□□ -0.32
Usp11Q99K46 Zfp597-201ENSMUST00000090522 5668 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Usp11Q99K46 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Trmt1-203ENSMUST00000109767 2138 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Nsd3-203ENSMUST00000136107 3818 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Pcsk7-209ENSMUST00000216672 3599 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm1995-201ENSMUST00000220838 2602 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm5187-201ENSMUST00000117317 991 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm14704-201ENSMUST00000120300 874 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm12291-201ENSMUST00000121627 311 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm44772-201ENSMUST00000207623 1191 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm32025-201ENSMUST00000217960 307 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm4935-201ENSMUST00000221316 1198 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 AC138604.1-201ENSMUST00000226969 739 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Usp11Q99K46 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.07□□□□□ -0.32
Usp11Q99K46 4933434E20Rik-202ENSMUST00000029552 1080 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.07□□□□□ -0.32
Usp11Q99K46 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Pax6-203ENSMUST00000111082 3116 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
Usp11Q99K46 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Usp11Q99K46 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Usp11Q99K46 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.06□□□□□ -0.32
Usp11Q99K46 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Usp11Q99K46 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Usp11Q99K46 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC13.06□□□□□ -0.32
Usp11Q99K46 Gm8062-201ENSMUST00000139696 444 ntBASIC13.06□□□□□ -0.32
Usp11Q99K46 Gm25261-201ENSMUST00000157416 134 ntBASIC13.06□□□□□ -0.32
Usp11Q99K46 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Usp11Q99K46 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
Usp11Q99K46 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms