Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm18018-201ENSMUST00000198273 408 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm9794-201ENSMUST00000202370 423 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm18624-201ENSMUST00000220966 658 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm26794-201ENSMUST00000180810 4312 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gm45776-201ENSMUST00000212366 1522 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Cog3-203ENSMUST00000227473 4197 ntBASIC12.5□□□□□ -0.41
Cdk9Q99J95 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cdk9Q99J95 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Slc29a1-213ENSMUST00000167692 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm12291-201ENSMUST00000121627 311 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm5745-201ENSMUST00000183748 313 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm44069-201ENSMUST00000204898 506 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Itm2b-204ENSMUST00000228637 783 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm6180-201ENSMUST00000065243 498 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.49□□□□□ -0.41
Cdk9Q99J95 Gm18262-201ENSMUST00000222560 1946 ntBASIC12.49□□□□□ -0.41
Cdk9Q99J95 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Kifap3-201ENSMUST00000027877 3946 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Rnh1-202ENSMUST00000167493 1656 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Rnh1-204ENSMUST00000210314 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Rpap2-205ENSMUST00000112655 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Nxph2-201ENSMUST00000102945 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Pnma5-202ENSMUST00000114540 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm26543-201ENSMUST00000180729 2221 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm23984-201ENSMUST00000157139 203 ntBASIC12.48□□□□□ -0.41
Cdk9Q99J95 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdk9Q99J95 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms