Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpap2Q8VC34 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Ppip5k1-202ENSMUST00000110625 5226 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Lrp8-206ENSMUST00000126573 2590 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm24934-201ENSMUST00000103764 111 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm24845-201ENSMUST00000158034 109 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Mir8109-201ENSMUST00000184375 117 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm44934-201ENSMUST00000208941 238 ntTSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm21769-201ENSMUST00000211922 111 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm30285-201ENSMUST00000214614 422 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gm36970-201ENSMUST00000193688 1859 ntBASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpap2Q8VC34 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rpap2Q8VC34 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rpap2Q8VC34 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Rpap2Q8VC34 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Rpap2Q8VC34 Ldb3-203ENSMUST00000022330 1586 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Rpap2Q8VC34 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm20554-201ENSMUST00000177421 2352 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 4732471J01Rik-204ENSMUST00000206436 2430 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Dnmbp-205ENSMUST00000212396 6100 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm14726-201ENSMUST00000120623 896 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm4034-201ENSMUST00000187674 480 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Gm4864-201ENSMUST00000219894 1461 ntBASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Rpap2Q8VC34 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms