Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.54□□□□□ -0.4
Slf1Q8R3P9 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Lgr5-206ENSMUST00000172806 2652 ntTSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm11400-201ENSMUST00000120853 1214 ntBASIC12.53□□□□□ -0.4
Slf1Q8R3P9 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Mir6392-201ENSMUST00000184924 108 ntBASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Ighv1-60-201ENSMUST00000195816 405 ntBASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Cln3-201ENSMUST00000032962 2386 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Slf1Q8R3P9 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Slf1Q8R3P9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 AC135669.1-201ENSMUST00000213585 412 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 AC238811.3-201ENSMUST00000225422 709 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm15823-201ENSMUST00000064305 670 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Hdac6-202ENSMUST00000115642 4069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Slf1Q8R3P9 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Picalm-213ENSMUST00000208742 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 AC166359.1-201ENSMUST00000220243 1871 ntBASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Slf1Q8R3P9 Ptprh-202ENSMUST00000166650 3642 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms