Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Gm13736-201ENSMUST00000119272 253 ntBASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Setd1a-201ENSMUST00000047075 6487 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Banp-201ENSMUST00000026354 1970 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim29Q8R2Q0 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 C1qtnf9-201ENSMUST00000025940 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Arap1-202ENSMUST00000084896 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Serinc2-202ENSMUST00000120126 1452 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ighv8-9-201ENSMUST00000103533 301 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ighv8-13-201ENSMUST00000103542 303 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Gm12314-201ENSMUST00000118104 538 ntBASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Gm10076-201ENSMUST00000073238 384 ntBASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ank2-217ENSMUST00000182610 2231 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Slc9b1-201ENSMUST00000078568 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim29Q8R2Q0 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim29Q8R2Q0 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim29Q8R2Q0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm5187-201ENSMUST00000117317 991 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Gm17823-201ENSMUST00000217830 1006 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 AC140406.1-201ENSMUST00000226481 465 ntBASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Tns2-201ENSMUST00000046144 4718 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Fgf12-201ENSMUST00000100024 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 Fn1-214ENSMUST00000188894 8043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim29Q8R2Q0 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms