Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Rtl5-204ENSMUST00000188731 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Alms1-ps1-201ENSMUST00000159498 2166 ntBASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ebf4Q8K4J2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Lyar-202ENSMUST00000114106 1504 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Faap20-202ENSMUST00000105627 710 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Auts2-212ENSMUST00000178555 309 ntBASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Gm16372-201ENSMUST00000073088 450 ntBASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ebf4Q8K4J2 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm7537-201ENSMUST00000221660 1414 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Aldoc-202ENSMUST00000102478 1700 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm26599-201ENSMUST00000180590 3189 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm28693-202ENSMUST00000190758 331 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm38223-201ENSMUST00000194484 695 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 AC165157.4-201ENSMUST00000220587 139 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm18262-201ENSMUST00000222560 1946 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Kremen1-201ENSMUST00000020662 4856 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Gm43760-201ENSMUST00000202120 3015 ntBASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.26□□□□□ -0.61
Ebf4Q8K4J2 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms