Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Cnot3Q8K0V4 Gm43720-201ENSMUST00000159067 6411 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 AC130671.2-201ENSMUST00000227224 1621 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Entpd5-203ENSMUST00000110272 4972 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Arhgap24-206ENSMUST00000112854 2991 ntTSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm11618-201ENSMUST00000117946 267 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm12384-201ENSMUST00000119228 919 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Ubl5-201ENSMUST00000129414 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm25927-201ENSMUST00000175058 117 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm6652-201ENSMUST00000186414 1070 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Rmi1-201ENSMUST00000042450 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Cnot3Q8K0V4 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Rdh8-201ENSMUST00000066387 1405 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm6992-201ENSMUST00000217973 1607 ntBASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm6034-201ENSMUST00000097331 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 0610040F04Rik-201ENSMUST00000137478 1734 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Rin2-201ENSMUST00000094480 4657 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm15703-201ENSMUST00000120250 880 ntBASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Lrrn1-201ENSMUST00000049285 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Bmp3-203ENSMUST00000200388 6609 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Zfp362-202ENSMUST00000106072 2812 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Rgr-203ENSMUST00000225070 4704 ntBASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Exog-201ENSMUST00000035094 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Abhd14b-209ENSMUST00000216130 1624 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Cnot3Q8K0V4 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms